Wilson, J. M., Erazo, N., Connors, E., Chamberlain, E. J., Clements, S. M., Carter, M. L., Smith, J. E., & Bowman, J. S. (2022). Substantial microbial community shifts in response to an exceptional harmful algal bloom in coastal Southern California. Elementa: Science of the Anthropocene, 10(1), 00088. https://doi.org/10.1525/elementa.2021.00088

Angelopoulos, M., Damm, E., Simões Pereira, P., Abrahamsson, K., Bauch, D., Bowman, J., Castellani, G., Creamean, J., Divine, D. V., Dumitrascu, A., Fons, S. W., Granskog, M. A., Kolabutin, N., Krumpen, T., Marsay, C., Nicolaus, M., Oggier, M., Rinke, A., Sachs, T., … Haas, C. (2022). Deciphering the Properties of Different Arctic Ice Types During the Growth Phase of MOSAiC: Implications for Future Studies on Gas Pathways. Frontiers in Earth Science, 10, 864523. https://doi.org/10.3389/feart.2022.864523

Peixoto, R. S., Voolstra, C. R., Sweet, M., Duarte, C. M., Carvalho, S., Villela, H., Lunshof, J. E., Gram, L., Woodhams, D. C., Walter, J., Roik, A., Hentschel, U., Thurber, R. V., Daisley, B., Ushijima, B., Daffonchio, D., Costa, R., Keller-Costa, T., Bowman, J. S., … Berg, G. (2022). Harnessing the microbiome to prevent global biodiversity loss. Nature Microbiology. https://doi.org/10.1038/s41564-022-01173-1

Buffo, J. J., Brown, E. K., Pontefract, A., Schmidt, B. E., Klempay, B., Lawrence, J., Bowman, J., Grantham, M., Glass, J. B., Plattner, T., Chivers, C., Doran, P., & the OAST Team. (2022). The Bioburden and Ionic Composition of Hypersaline Lake Ices: Novel Habitats on Earth and Their Astrobiological Implications. Astrobiology, ast.2021.0078. https://doi.org/10.1089/ast.2021.0078

Piszkin, L., & Bowman, J. (2022). Extremophile enzyme optimization for low temperature and high salinity are fundamentally incompatible. Extremophiles, 26(1), 11. https://doi.org/10.1007/s00792-021-01254-9

Dutta, A., Goldman, T., Keating, J., Burke, E., Williamson, N., Dirmeier, R., & Bowman, J. S. (2022). Machine learning predicts biogeochemistry from microbial community structure in a complex model system. Microbiology Spectrum, 10(1), 17.

Kim, H. H., Bowman, J. S., Luo, Y. W., Ducklow, H. W., Schofield, O. M., Steinberg, D. K., & Doney, S. C. (2022). Modeling polar marine ecosystem functions guided by bacterial physiological and taxonomic traits. Biogeosciences, 19(1), 117–136. https://doi.org/10.5194/bg-19-117-2022

Toh, T. S., Chong, C. W., Lim, S. Y., Bowman, J., Cirstea, M., Lin, C. H., Chen, C. C., Appel-Cresswell, S., Finlay, B. B., & Tan, A. H. (2022). Gut microbiome in Parkinson’s disease: New insights from meta-analysis. Parkinsonism & Related Disorders, 94, 1–9. https://doi.org/10.1016/j.parkreldis.2021.11.017

Creamean, J. M., Barry, K., Hill, T. C. J., Hume, C., DeMott, P. J., Shupe, M. D., Dahlke, S., Willmes, S., Schmale, J., Beck, I., Hoppe, C. J. M., Fong, A., Chamberlain, E., Bowman, J., Scharien, R., & Persson, O. (2022). Annual cycle observations of aerosols capable of ice formation in central Arctic clouds. Nature Communications, 13(1), 3537. https://doi.org/10.1038/s41467-022-31182-x

Dutta, A., Valle, F., Goldman, T., Keating, J., Burke, E., Williamson, N., Dirmeier, R., & Bowman, J. S. (2021). Detection of sulfate-reducing bacteria as an indicator for successful mitigation of sulfide production. Applied and Environmental Microbiology, 87(23), 18. https://doi.org/10.1128/aem.01748-21

Dasarathy, S., Kar, J., Tackett, J., Rodier, S. D., Lu, X., Vaughan, M., Toth, T. D., Trepte, C., & Bowman, J. S. (2021). Multi-year seasonal trends in sea ice, chlorophyll concentration, and marine aerosol optical depth in the Bellingshausen Sea. Journal of Geophysical Research-Atmospheres, 126(21), 19. https://doi.org/10.1029/2021jd034737

Steiner, N. S., Bowman, J., Campbell, K., Chierici, M., Eronen-Rasimus, E., Falardeau, M., Flores, H., Fransson, A., Herr, H., Insley, S. J., Kauko, H. M., Lannuzel, D., Loseto, L., Lynnes, A., Majewski, A., Meiners, K. M., Miller, L. A., Michel, L. N., Moreau, S., … Wongpan, P. (2021). Climate change impacts on sea-ice ecosystems and associated ecosystem services. Elementa-Science of the Anthropocene, 9(1), 55. https://doi.org/10.1525/elementa.2021.00007

Brown, M. S., Bowman, J. S., Lin, Y. J., Feehan, C. J., Moreno, C. M., Cassar, N., Marchetti, A., & Schofield, O. M. (2021). Low diversity of a key phytoplankton group along the West Antarctic Peninsula. Limnology and Oceanography. https://doi.org/10.1002/lno.11765

Wilson, J. M., Chamberlain, E. J., Erazo, N., Carter, M. L., & Bowman, J. S. (2021). Recurrent microbial community types driven by nearshore and seasonal processes in coastal Southern California. Environmental Microbiology. https://doi.org/10.1111/1462-2920.15548

Klempay, B., Arandia-Gorostidi, N., Dekas, A. E., Bartlett, D. H., Carr, C. E., Doran, P. T., Dutta, A., Erazo, N., Fisher, L. A., Glass, J. B., Pontefract, A., Som, S. M., Wilson, J. M., Schmidt, B. E., & Bowman, J. S. (2021). Microbial diversity and activity in Southern California salterns and bitterns: analogues for remnant ocean worlds. Environmental Microbiology. https://doi.org/10.1111/1462-2920.15440

Erazo, N. G., & Bowman, J. S. (2021). Sensitivity of the mangrove-estuarine microbial community to aquaculture effluent. Iscience, 24(3). https://doi.org/10.1016/j.isci.2021.102204

Tan, A. H., Chong, C. W., Lim, S. Y., Yap, I. K. S., Teh, C. S. J., Loke, M. F., Song, S. L., Tan, J. Y., Ang, B. H., Tan, Y. Q., Kho, M. T., Bowman, J., Mahadeva, S., Yong, H. S., & Lang, A. E. (2021). Gut microbial ecosystem in Parkinson disease: New clinicobiological insights from multi-omics. Annals of Neurology, 89(3), 546–559. https://doi.org/10.1002/ana.25982

Bowman, J. S., Van Mooy, B. A. S., Lowenstein, D. P., Fredricks, H. F., Hansel, C. M., Gast, R., Collins, J. R., Couto, N., & Ducklow, H. W. (2021). Whole community metatranscriptomes and lipidomes reveal diverse responses among Antarctic phytoplankton to changing ice conditions. Frontiers in Marine Science, 8. https://doi.org/10.3389/fmars.2021.593566

Wilson, J. M., Carter, M. L., Muhle, J., & Bowman, J. S. (2020). Using empirical dynamic modeling to assess relationships between atmospheric trace gases and eukaryotic phytoplankton populations in coastal Southern California. Marine Chemistry, 227. https://doi.org/10.1016/j.marchem.2020.103896

Dutta, A., Smith, B., Goldman, T., Walker, L., Streets, M., Eden, B., Dirmeier, R., & Bowman, J. S. (2020). Understanding microbial community dynamics in up-flow bioreactors to improve mitigation strategies for oil souring. Frontiers in Microbiology, 11. https://doi.org/10.3389/fmicb.2020.585943

Lannuzel, D., Tedesco, L., van Leeuwe, M., Campbell, K., Flores, H., Delille, B., Miller, L., Stefels, J., Assmy, P., Bowman, J., Brown, K., Castellani, G., Chierici, M., Crabeck, O., Damm, E., Else, B., Fransson, A., Fripiat, F., Geilfus, N. X., … Wongpan, P. (2020). The future of Arctic sea-ice biogeochemistry and ice-associated ecosystems. Nature Climate Change, 10(11), 983–992. https://doi.org/10.1038/s41558-020-00940-4

Neumann, B., Mikoleit, A., Bowman, J. S., Ducklow, H. W., & Muller, F. (2019). Ecosystem service supply in the Antarctic peninsula region: Evaluating an expert-based assessment approach and a novel seascape data model. Frontiers in Environmental Science, 7. https://doi.org/10.3389/fenvs.2019.00157

Sutherland, K. M., Coe, A., Gast, R. J., Plummer, S., Suffridge, C. P., Diaz, J. M., Bowman, J. S., Wankel, S. D., & Hansel, C. M. (2019). Extracellular superoxide production by key microbes in the global ocean. Limnology and Oceanography. https://doi.org/10.1002/lno.11247

Webb, S. J., Rabsattt, T., Erazo, N., & Bowman, J. S. (2019). Impacts of Zostera eelgrasses on microbial community structure in San Diego coastal waters. Elementa-Science of the Anthropocene, 7. https://doi.org/10.1525/elementa.350

Hendrix, A. R., Hurford, T. A., Barge, L. M., Bland, M. T., Bowman, J. S., Brinckerhoff, W., Buratti, B. J., Cable, M. L., Castillo-Rogez, J., Collins, G. C., Diniega, S., German, C. R., Hayes, A. G., Hoehler, T., Hosseini, S., Howett, C. J. A., McEwen, A. S., Neish, C. D., Neveu, M., … Vance, S. D. (2019). The NASA Roadmap to Ocean Worlds. Astrobiology, 19(1), 1–27. https://doi.org/10.1089/ast.2018.1955

Bowman, J. S. (2018). Identification of microbial dark matter in Antarctic environments. Frontiers in Microbiology, 9. https://doi.org/10.3389/fmicb.2018.03165

Bowman, J. S., Kavanaugh, M. T., Doney, S. C., & Ducklow, H. W. (2018). Recurrent seascape units identify key ecological processes along the western Antarctic Peninsula. Global Change Biology, 24(7), 3065–3078. https://doi.org/10.1111/gcb.14161

Collins, J. R., Fredricks, H. F., Bowman, J. S., Ward, C. P., Moreno, C., Longnecker, K., Marchetti, A., Hansel, C. M., Ducklow, H. W., & Van Mooy, B. A. S. (2018). The molecular products and biogeochemical significance of lipid photooxidation in West Antarctic surface waters. Geochimica Et Cosmochimica Acta, 232, 244–264. https://doi.org/10.1016/j.gca.2018.04.030

Arfken, A., Song, B., Bowman, J. S., & Piehler, M. (2017). Denitrification potential of the eastern oyster microbiome using a 16S rRNA gene based metabolic inference approach. PLOS ONE, 12(9). https://doi.org/10.1371/journal.pone.0185071

Bowman, J. S., Amaral-Zettler, L. A., Rich, J. J., Luria, C. M., & Ducklow, H. W. (2017). Bacterial community segmentation facilitates the prediction of ecosystem function along the coast of the western Antarctic Peninsula. Isme Journal, 11(6), 1460–1471. https://doi.org/10.1038/ismej.2016.204

Bowman, J. S., & Deming, J. W. (2017). Wind-driven distribution of bacteria in coastal Antarctica: evidence from the Ross Sea region. Polar Biology, 40(1), 25–35. https://doi.org/10.1007/s00300-016-1921-2

Bowman, J. S., Vick-Majors, T. J., Morgan-Kiss, R., Takacs-Vesbach, C., Ducklow, H. W., & Priscu, J. C. (2016). Microbial community dynamics in two polar extremes: The lakes of the McMurdo dry valleys and the West Antarctic Peninsula marine ecosystem. Bioscience, 66(10), 829–847. https://doi.org/10.1093/biosci/biw103

Domagal-Goldman, S. D., Wright, K. E., Adamala, K., {Arina de la Rubia}, L., Bond, J., Dartnell, L. R., Goldman, A. D., Lynch, K., Naud, M.-E., Paulino-Lima, I. G., Singer, K., Walter-Antonio, M., Abrevaya, X. C., Anderson, R., Arney, G., Atri, D., Azúa-Bustos, A., Bowman, J. S., Brazelton, W. J., … Wong, T. (2016). The Astrobiology Primer v2.0. Astrobiology, 16(8), 561–653. https://doi.org/10.1089/ast.2015.1460

Miller LA, Fripiat F, Else BG, Bowman JS, Brown KA, Collins, R. E., Ewert, M., Meiners, K. M., Michel, C., Nishioka, J., Nomura, D., Papadimitriou, S., Russell, L. M., Sorenson, L., Thomas, D., Tison, J., van Leeuwe, M., Vancoppenolle, M., Wolff, E., & Zhou, J. (2015). Methods for biogeochemical studies of sea ice: The state of the art, caveats, and recommendations. Elem. Sci. Anth., 3. https://doi.org/10.12952/journal.elementa.000038

Bowman, J. S. (2015). The relationship between sea ice bacterial community structure and biogeochemistry: A synthesis of current knowledge and known unknowns. Elementa, 3, 1–20. https://doi.org/10.12952/journal.elementa.000072

Bowman, J. S., & Ducklow, H. W. (2015). Microbial Communities Can Be Described by Metabolic Structure: A General Framework and Application to a Seasonally Variable, Depth-Stratified Microbial Community from the Coastal West Antarctic Peninsula. PLOS ONE, 10(8), e0135868. https://doi.org/10.1371/journal.pone.0135868

Bowman, J. S., & Deming, J. W. (2014). Alkane hydroxylase genes in psychrophile genomes and the potential for cold active catalysis. Bmc Genomics, 15(1), 1120. https://doi.org/10.1186/1471-2164-15-1120

Barber, D. G., Ehn, J. K., Pućko, M., Rysgaard, S., Deming, J. W., Bowman, J. S., Papakyriakou, T., Galley, R. J., & Søgaard, D. H. (2014). Frost flowers on young Arctic sea ice: The climatic, chemical, and microbial significance of an emerging ice type. Journal of Geophysical Research: Atmospheres, 119(20), 11,593-11,612. https://doi.org/10.1002/2014JD021736

Bowman, J. S., Berthiaume, C. T., Armbrust, E. V., & Deming, J. W. (2014). The genetic potential for key biogeochemical processes in Arctic frost flowers and young sea ice revealed by metagenomic analysis. FEMS Microbiology Ecology, 89(2), 376–387. https://doi.org/10.1111/1574-6941.12331

Bowman, J. S., Larose, C., Vogel, T. M., & Deming, J. W. (2013). Selective occurrence of Rhizobiales in frost flowers on the surface of young sea ice near Barrow, Alaska and distribution in the polar marine rare biosphere. Environmental Microbiology Reports, 5(4), 575–582. https://doi.org/10.1111/1758-2229.12047

Stüeken, E. E., Anderson, R. E., Bowman, J. S., Brazelton, W. J., Colangelo-Lillis, J., Goldman, A. D., Som, S. M., & Baross, J. A. (2013). Did life originate from a global chemical reactor? Geobiology, 11(2), 101–126. https://doi.org/10.1111/gbi.12025

Bowman, J. S., Rasmussen, S., Blom, N., Deming, J. W., Rysgaard, S., & Sicheritz-Ponten, T. (2012). Microbial community structure of Arctic multiyear sea ice and surface seawater by 454 sequencing of the 16S RNA gene. Isme Journal, 6(1), 11–20.

Bowman, J. S., & Deming, J. W. (2010). Elevated bacterial abundance and exopolymers in saline frost flowers and implications for atmospheric chemistry and microbial dispersal. Geophysical Research Letters, 37(13), n/a-n/a. https://doi.org/10.1029/2010GL043020

Bowman, J. S., & Sachs, J. P. (2008). Chemical and physical properties of some saline lakes in Alberta and Saskatchewan. Saline Systems, 4(1), 3. https://doi.org/10.1186/1746-1448-4-3