Publications

32 publications

2021

Wilson, J. M., Chamberlain, E. J., Erazo, N., Carter, M. L., & Bowman, J. S. (2021). Recurrent microbial community types driven by nearshore and seasonal processes in coastal Southern California. Environmental Microbiology. doi: 10.1111/1462-2920.15548
Brown, M. S., Bowman, J. S., Lin, Y. J., Feehan, C. J., Moreno, C. M., Cassar, N., ... Schofield, O. M. (2021). Low diversity of a key phytoplankton group along the West Antarctic Peninsula. Limnology and Oceanography. doi: 10.1002/lno.11765
Klempay, B., Arandia-Gorostidi, N., Dekas, A. E., Bartlett, D. H., Carr, C. E., Doran, P. T., ... Bowman, J. S. (2021). Microbial diversity and activity in Southern California salterns and bitterns: analogues for remnant ocean worlds. Environmental Microbiology. doi: 10.1111/1462-2920.15440
Tan, A. H., Chong, C. W., Lim, S. Y., Yap, I. K. S., Teh, C. S. J., Loke, M. F., ... Lang, A. E. (2021). Gut microbial ecosystem in Parkinson disease: New clinicobiological insights from multi-omics. Annals of Neurology, 89(3), 546-559. doi: 10.1002/ana.25982
Erazo, N. G., & Bowman, J. S. (2021). Sensitivity of the mangrove-estuarine microbial community to aquaculture effluent. Iscience, 24(3). doi: 10.1016/j.isci.2021.102204
Bowman, J. S., Van Mooy, B. A. S., Lowenstein, D. P., Fredricks, H. F., Hansel, C. M., Gast, R., ... Ducklow, H. W. (2021). Whole community metatranscriptomes and lipidomes reveal diverse responses among Antarctic phytoplankton to changing ice conditions. Frontiers in Marine Science, 8(593566). doi: 10.3389/fmars.2021.593566

2020

Dutta, A., Smith, B., Goldman, T., Walker, L., Streets, M., Eden, B., ... Bowman, J. S. (2020). Understanding microbial community dynamics in up-flow bioreactors to improve mitigation strategies for oil souring. Frontiers in Microbiology, 11(585943). doi: 10.3389/fmicb.2020.585943
Wilson, J. M., Carter, M. L., Muhle, J., & Bowman, J. S. (2020). Using empirical dynamic modeling to assess relationships between atmospheric trace gases and eukaryotic phytoplankton populations in coastal Southern California. Marine Chemistry, 227(103896). doi: 10.1016/j.marchem.2020.103896
Lannuzel, D., Tedesco, L., van Leeuwe, M., Campbell, K., Flores, H., Delille, B., ... Wongpan, P. (2020). The future of Arctic sea-ice biogeochemistry and ice-associated ecosystems. Nature Climate Change, 10(11), 983-992. doi: 10.1038/s41558-020-00940-4

2019

Neumann, B., Mikoleit, A., Bowman, J. S., Ducklow, H. W., & Muller, F. (2019). Ecosystem service supply in the Antarctic peninsula region: Evaluating an expert-based assessment approach and a novel seascape data model. Frontiers in Environmental Science, 7(157). doi: 10.3389/fenvs.2019.00157
Webb, S. J., Rabsattt, T., Erazo, N., & Bowman, J. S. (2019). Impacts of Zostera eelgrasses on microbial community structure in San Diego coastal waters. Elementa-Science of the Anthropocene, 7(11). doi: 10.1525/elementa.350
Hendrix, A. R., Hurford, T. A., Barge, L. M., Bland, M. T., Bowman, J. S., Brinckerhoff, W., ... Vance, S. D. (2019). The NASA Roadmap to Ocean Worlds. Astrobiology, 19(1), 1-27. doi: 10.1089/ast.2018.1955

2018

Bowman, J. S. (2018). Identification of microbial dark matter in Antarctic environments. Frontiers in Microbiology, 9(3165). doi: 10.3389/fmicb.2018.03165
Collins, J. R., Fredricks, H. F., Bowman, J. S., Ward, C. P., Moreno, C., Longnecker, K., ... Van Mooy, B. A. S. (2018). The molecular products and biogeochemical significance of lipid photooxidation in West Antarctic surface waters. Geochimica Et Cosmochimica Acta, 232, 244-264. doi: 10.1016/j.gca.2018.04.030
Bowman, J. S., Kavanaugh, M. T., Doney, S. C., & Ducklow, H. W. (2018). Recurrent seascape units identify key ecological processes along the western Antarctic Peninsula. Global Change Biology, 24(7), 3065-3078. doi: 10.1111/gcb.14161

2017

Arfken, A., Song, B., Bowman, J. S., & Piehler, M. (2017). Denitrification potential of the eastern oyster microbiome using a 16S rRNA gene based metabolic inference approach. Plos One, 12(9). doi: 10.1371/journal.pone.0185071
Bowman, J. S., Amaral-Zettler, L. A., Rich, J. J., Luria, C. M., & Ducklow, H. W. (2017). Bacterial community segmentation facilitates the prediction of ecosystem function along the coast of the western Antarctic Peninsula. Isme Journal, 11(6), 1460-1471. doi: 10.1038/ismej.2016.204
Bowman, J. S., & Deming, J. W. (2017). Wind-driven distribution of bacteria in coastal Antarctica: evidence from the Ross Sea region. Polar Biology, 40(1), 25-35. doi: 10.1007/s00300-016-1921-2

2016

Bowman, J. S., Vick-Majors, T. J., Morgan-Kiss, R., Takacs-Vesbach, C., Ducklow, H. W., & Priscu, J. C. (2016). Microbial community dynamics in two polar extremes: The lakes of the McMurdo dry valleys and the West Antarctic Peninsula marine ecosystem. Bioscience, 66(10), 829-847. doi: 10.1093/biosci/biw103
Domagal-Goldman, S. D., Wright, K. E., Adamala, K., {Arina de la Rubia}, L., Bond, J., Dartnell, L. R., ... Wong, T. (2016). The Astrobiology Primer v2.0. Astrobiology, 16(8), 561–653. doi: 10.1089/ast.2015.1460

2015

LA, M., F, F., BG, E., JS, B., KA, B., Collins, R. E., ... Zhou, J. (2015). Methods for biogeochemical studies of sea ice: The state of the art, caveats, and recommendations. Elem. Sci. Anth., 3. doi: 10.12952/journal.elementa.000038
Bowman, J. S. (2015). The relationship between sea ice bacterial community structure and biogeochemistry: A synthesis of current knowledge and known unknowns. Elementa, 3, 1–20. doi: 10.12952/journal.elementa.000072
Bowman, J. S., & Ducklow, H. W. (2015). Microbial Communities Can Be Described by Metabolic Structure: A General Framework and Application to a Seasonally Variable, Depth-Stratified Microbial Community from the Coastal West Antarctic Peninsula. PLOS ONE, 10(8), e0135868. doi: 10.1371/journal.pone.0135868

2014

Bowman, J. S., & Deming, J. W. (2014). Alkane hydroxylase genes in psychrophile genomes and the potential for cold active catalysis. BMC Genomics, 15(1), 1120. doi: 10.1186/1471-2164-15-1120
Bowman, J. S., Berthiaume, C. T., Armbrust, E. V., & Deming, J. W. (2014). The genetic potential for key biogeochemical processes in Arctic frost flowers and young sea ice revealed by metagenomic analysis. FEMS Microbiology Ecology, 89(2), 376-387. doi: 10.1111/1574-6941.12331
Barber, D. G., Ehn, J. K., Pućko, M., Rysgaard, S., Deming, J. W., Bowman, J. S., ... Søgaard, D. H. (2014). Frost flowers on young Arctic sea ice: The climatic, chemical, and microbial significance of an emerging ice type. Journal of Geophysical Research: Atmospheres, 119(20), 11,593-11,612. doi: 10.1002/2014JD021736

2013

Stüeken, E. E., Anderson, R. E., Bowman, J. S., Brazelton, W. J., Colangelo-Lillis, J., Goldman, A. D., ... Baross, J. A. (2013). Did life originate from a global chemical reactor?. Geobiology, 11(2), 101-126. doi: 10.1111/gbi.12025
Bowman, J. S., Larose, C., Vogel, T. M., & Deming, J. W. (2013). Selective occurrence of Rhizobiales in frost flowers on the surface of young sea ice near Barrow, Alaska and distribution in the polar marine rare biosphere. Environmental Microbiology Reports, 5(4), 575-582. doi: 10.1111/1758-2229.12047

2012

Bowman, J. S., Rasmussen, S., Blom, N., Deming, J. W., Rysgaard, S., & Sicheritz-Ponten, T. (2012). Microbial community structure of Arctic multiyear sea ice and surface seawater by 454 sequencing of the 16S RNA gene. ISME J, 6(1), 11-20.

2010

Bowman, J. S., & Deming, J. W. (2010). Elevated bacterial abundance and exopolymers in saline frost flowers and implications for atmospheric chemistry and microbial dispersal. Geophysical Research Letters, 37(13), n/a-n/a. doi: 10.1029/2010GL043020

2008

Bowman, J. S., & Sachs, J. P. (2008). Chemical and physical properties of some saline lakes in Alberta and Saskatchewan. Saline Systems, 4(1), 3. doi: 10.1186/1746-1448-4-3

Sutherland, K. M., Coe, A., Gast, R. J., Plummer, S., Suffridge, C. P., Diaz, J. M., ... Hansel, C. M. (). Extracellular superoxide production by key microbes in the global ocean. Limnology and Oceanography. doi: 10.1002/lno.11247